A simplified model for solid phase synthesis flow reactors

Added on:
26 Oct, 2026

Flow reactors greatly reduce cycle times in solid-phase synthesis (SPS) but typically operate with a large excess of reagent, generating considerable amounts of waste. The lack of a mathematical framework limits the implementation of optimal operating conditions. A transient-dispersion model integrating reaction kinetics and axial dispersion is introduced to predict the conversion of solid-bound reagents in packed-bed flow reactors (6.6 mm I.D., flow rate range: 1–4 mL min−1). The model is experimentally validated using levaloyl (Lev) ester and 9-fluorenyl-methoxycarbonate (Fmoc) deprotection at the milligram scale on a mannoside-functionalized resin. When the Damköhler number (Da) is less than 0.25, the system behaves as a pseudo-first-order batch reactor. Direct monitoring of a mannoside building block coupling via a variable-bed flow reactor (VBFR) confirms that the pseudo-first-order approximation predicts solid-bound product formation. The Da < 0.25 guideline provides a simple and practical tool for designing SPS processes.

Equipment used in this paper: R-Series Flow Chemistry System, Variable-Bed Flow Reactor (VBFR)

  • Pinzón-López S1,2
  • Hsu W1,3
  • Ebert D1,3
  • Kraume M2
  • Seeberger P1,3
  • Danglad-Flores J1
  •   1Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.
  • 2Chair of Chemical and Process Engineering, Technische Universität Berlin, Ackerstraße 76, 13355 Berlin, Germany.
  • 3Institute of Chemistry and Biochemistry, Freie Universitaet Berlin, Altensteinstraße 23a, 14195 Berlin, Germany.
A simplified model for solid phase synthesis flow reactors
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